BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018E01SP1|AL427321
(695 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1128 1338 0.0
>3x_Contig1128
Length = 4759
Score = 1338 bits (673), Expect = 0.0
Identities = 683/687 (99%), Gaps = 1/687 (0%)
Strand = Plus / Minus
Query: 10 acatacttgaacttgattccaatcagatt-cgatgcatctgtatccttatcataccaacc 68
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2049 acatacttgaacttgattccaatcagattacgatgcatctgtatccttatcataccaacc 1990
Query: 69 actagaacaatggaaagcatcaaaggataacttggatggtttattggaagtgctggaaca 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1989 actagaacaatggaaagcatcaaaggataacttggatggtttattggaagtgctggaaca 1930
Query: 129 agagatcgaccactatcaagttactgaatttgccccaagaaatgatttcattgaagatga 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1929 agagatcgaccactatcaagttactgaatttgccccaagaaatgatttcattgaagatga 1870
Query: 189 accagaagctaatgagcatggtgtcaaggaaattttgggttctatcttctctatggttga 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1869 accagaagctaatgagcatggtgtcaaggaaattttgggttctatcttctctatggttga 1810
Query: 249 vagattggacgatgaatttagcaaatcccttttgaacattgacactcgttccagtgaata 308
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1809 aagattggacgatgaatttagcaaatcccttttgaacattgacactcgttccagtgaata 1750
Query: 309 catggaacgtttgagagatgaacaatctatttacaatttgattatcagatcccaattgta 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1749 catggaacgtttgagagatgaacaatctatttacaatttgattatcagatcccaattgta 1690
Query: 369 ctttgaacgtgtaactgcagaagaacaccgcgatagacttttggcccgtgtcttcaacag 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1689 ctttgaacgtgtaactgcagaagaacaccgcgatagacttttggcccgtgtcttcaacag 1630
Query: 429 aagacttgaacatatctactacaagtccgacaagctcatctctattatggraaccgttgc 488
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1629 aagacttgaacatatctactacaagtccgacaagctcatctctattatggaaaccgttgc 1570
Query: 489 atggaaacaaattcgtgaaggaactgcgtcccttgaatcctctttcgttcgtttgaatga 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1569 atggaaacaaattcgtgaaggaactgcgtcccttgaatcctctttcgttcgtttgaatga 1510
Query: 549 atcagattccgcagatgccgattacaacttcaaggtcatctctgaattgtccgatttctt 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 atcagattccgcagatgccgattacaacttcaaggtcatctctgaattgtccgatttctt 1450
Query: 609 aattaaacaaaagagtaacaacgtgttcaactacagaaaaggtaccttgtacaaaacata 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1449 aattaaacaaaagagtaacaacgtgttcaactacagaaaaggtaccttgtacaaaacata 1390
Query: 669 ttatattgcrttgaaccaagaatacgc 695
||||||||| |||||||||||||||||
Sbjct: 1389 ttatattgcattgaaccaagaatacgc 1363
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5656
Number of Sequences: 1807
Number of extensions: 5656
Number of successful extensions: 133
Number of sequences better than 1.0e-20: 1
length of query: 695
length of database: 10,358,551
effective HSP length: 16
effective length of query: 679
effective length of database: 10,329,639
effective search space: 7013824881
effective search space used: 7013824881
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)